BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012E06LP1|AL426375
(785 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1573 1543 0.0
>3x_Contig1573
Length = 10819
Score = 1543 bits (777), Expect = 0.0
Identities = 782/785 (99%)
Strand = Plus / Plus
Query: 1 gtatcaccccctatcagttcagaatcttctgatagatatataagtaaagtccactgagtg 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4491 gtatcaccccctatcagttcagaatctcctgatagatatataagtaaagtccactgagtg 4550
Query: 61 gttcccatcctgggaacgtttacagattcatcataatgcctcccaaaatgatggcccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4551 gttcccatcctgggaacgtttacagattcatcataatgcctcccaaaatgatggcccttc 4610
Query: 121 tcatatctgtaaactcgtaactgcgggttaagaccctttgcagtgctgaactgtagatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4611 tcatatctgtaaactcgtaactgcgggttaagaccctttgcagtgctgaactgtagatca 4670
Query: 181 tcagcaatgtacggatcttgtaacaggcatttttgaatccttgaccaaataatggaagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4671 tcagcaatgtacggatcttgtaacaggcatttttgaatccttgaccaaataatggaagct 4730
Query: 241 atttcttcgtcagtkatagaaaacctatcgttggctcttgcggcgaagtctttagttcca 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4731 atttcttcgtcagtgatagaaaacctatcgttggctcttgcggcgaagtctttagttcca 4790
Query: 301 cgttgcgagaaagattccatgacgtttgagcctgaaatatgacggatcaacacatcacat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4791 cgttgcgagaaagattccatgacgtttgagcctgaaatatgacggatcaacacatcacat 4850
Query: 361 agtttcttgtcaaagaacttgttgatgagtatcactttggagtcctgttcgacctctgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4851 agtttcttgtcaaagaacttgttgatgagtatcactttggagtcctgttcgacctctgga 4910
Query: 421 tatggaatgaattcgtaattgtgcttctcactattctcatttaacgaataaagttcaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4911 tatggaatgaattcgtaattgtgcttctcactattctcatttaacgaataaagttcaatg 4970
Query: 481 ggaaacttgaaagcagttgattcactcttaggaaccttcttacccatagctgctgaacgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4971 ggaaacttgaaagcagttgattcactcttaggaaccttcttacccatagctgctgaacgt 5030
Query: 541 atggtcaactagtagcgacggccagtaccttacttaatgcgtaacatgctatagaactgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5031 atggtcaactagtagcgacggccagtaccttacttaatgcgtaacatgctatagaactgg 5090
Query: 601 gttgtcgtttgaaataaaagaaccatttagattatgtgttggaactacatctgaatagaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5091 gttgtcgtttgaaataaaagaaccatttagattatgtgttggaactacatctgaatagaa 5150
Query: 661 tagagataattaatgadaacgatataattgtattaaaacaatggaagaataaaagtttaa 720
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5151 tagagataattaatgaaaacgatataattgtattaaaacaatggaagaataaaagtttaa 5210
Query: 721 gcggatgttacatatgccggcttgcttttgatagcaggtgacattccgctagtggaaatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5211 gcggatgttacatatgccggcttgcttttgatagcaggtgacattccgctagtggaaatg 5270
Query: 781 tattt 785
|||||
Sbjct: 5271 tattt 5275
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5224
Number of Sequences: 1807
Number of extensions: 5224
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 785
length of database: 10,358,551
effective HSP length: 16
effective length of query: 769
effective length of database: 10,329,639
effective search space: 7943492391
effective search space used: 7943492391
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)